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[Botany • 2020] Tiganophyton karasense • From the Frying Pan: An Unusual Dwarf Shrub from Namibia Turns Out To Be, Tiganophytaceae, A New Brassicalean Family

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Tiganophyton karasense Swanepoel, F.Forest & A.E.van Wyk

in Swanepoel, Chase, Christenhusz, ... et van Wyk, 2020. 
 Photos: W. Swanepoel, Art work: Daleen Roodt.

Abstract
Tiganophyton karasense, an evergreen dwarf shrub, is described as a new species. A new genus and family are also proposed for it in the order Brassicales. Phylogenetic analysis of DNA sequence data indicate that Tiganophyton is sister to Bataceae/Salvadoraceae, and all three sister to Koeberliniaceae. First realized to be undescribed in 2010, T. karasense is a rare species known only from three localities in the arid Karas Region, southern Namibia. These small shrubs grow near the edges of seasonal pans on calcareous substrate underlaid by shales and mudstones of the Prince Albert Formation of the Karoo Supergroup. Morphological characters diagnostic of the new family include: a marked differentiation into long and short shoots; dimorphic, spirally arranged leaves; glucosinolate production; bisexual laterally flattened flowers borne singly in bract axils on short shoots only; tetramerous calyx, corolla and androecium with fused sepals and free, non-clawed petals; a staminal disc, but no nectary glands; deeply bilobed ovary with a gynobasic style; S-shaped gynophore supporting a bilocular, horizontally orientated or inverted ovary; two ovules per locule; and a dry, persistent fruit, provisionally interpreted as a one-seeded nutlet. Based on IUCN Red List categories and criteria, a conservation assessment of Vulnerable (VU D1) is recommended for Tiganophyton karasense.

Keywords: Bataceae, Brassicales, Koeberliniaceae, limestone, mudstone, seasonal pans, Karoo Supergroup, endemism, Karas Region, Salvadoraceae, taxonomy, Tiganophytaceae, Tiganophyton, Eudicots

FIGURE 2. Tiganophyton karasense Swanepoel, F.Forest & A.E.van Wyk.
 A. Plant habit and habitat. B. Part of an old long shoot showing short shoots with their rosettes of foliage leaves (mainly) and bracts. C. Young, actively elongating long shoots with short shoots not yet fully developed in leaf axils; arrows indicate where a long shoot emerges from the apex of a short shoot. D. Long shoot densely covered with short shoots, the latter bearing flowers. Photographs: W. Swanepoel.


FIGURE 3.  Tiganophyton karasense Swanepoel, F.Forest & A.E.van Wyk.
 A. Branchlet with short and long shoots; parts of oldest stem with scars left by withered short shoots. B. Short shoot with three flowers. C. Long shoot developing from apex of a short shoot. D. Long shoot leaves; dorsal view left, ventral view right. E. Short shoot leaves; dorsal view left, ventral view right. F. Semi-stylized depiction of a flower (in reality floral parts closely packed with gynophore tightly appressed to ovary), with calyx, two front stamens and a front petal removed. Note gynophore bent in near S-shape, horizontal orientated bilobed ovary, and gynobasic style (portion of style between ovary lobes indicated with stippling; ovary lobes opaque). G. Flower (side view). H. Calyx viewed from outside. I. Calyx opened out and viewed from inside. J. Nutlet. K. Flattened remains of flower with nutlet enclosed in the persistent calyx.


Scale bar = 10 mm (A), or 1 mm (B–K). 
A, C, J & K from Swanepoel 364 and B & C–I from Swanepoel 365. 
Artist: Daleen Roodt.

Tiganophytaceae Swanepoel, F.Forest & A.E.vanWyk, fam. nov. 

Type:–– Tiganophyton Swanepoel, F.Forest & A.E.van Wyk. 

A member of Brassicales, our new family is most closely related to Bataceae and Salvadoraceae and more distantly to Koeberliniaceae. It is morphologically distinct from these and all other known families of the order and easily distinguished by, amongst others, the following combination of characters (for a more comprehensive comparison, see Table 1): dwarf shrub with stems distinctly differentiated into long and short shoots; leaves minute, dimorphic, spirally arranged; glucosinolates present; flowers bisexual, laterally flattened, borne singly in bract axils on short shoots only; calyx, corolla and androecium tetramerous; sepals fused; petals free, not clawed; staminal disc (receptacle?) present; nectary glands absent; ovary deeply bilobed, apparently bilocular; gynophore present, bent in near S-shape; ovary horizontally orientated or occasionally inverted; style gynobasic; ovules two per locule; fruit a dry, persistent, oneseeded nutlet.

Tiganophytaceae differ from Bataceae, Salvadoraceae and Koeberliniaceae by the distinct differentiation of vegetative axes into long and short shoots (vs. mainly long shoots), dimorphic foliage leaves (vs. monomorphic), fruit a nutlet (vs. berry or drupe), ovary bilobed and horizontally orientated or inverted (vs. not lobed and upright), and gynobasic style (vs. apical). It furthermore is easily distinguished from Bataceae by spirally arranged leaves (vs. decussate), hermaphroditic plants (vs. monoecious or dioecious), no stipules (vs. present, early deciduous), solitary flowers in bract axils (vs. in cone-like spikes), sessile petals (vs. long clawed in males; absent in females), gynophore present (vs. absent), and two ovules per locule (vs. one); from Salvadoraceae it differs also by having no stipules (vs. present), spirally arranged leaves (vs. opposite), solitary flowers in bract axils (vs. racemes, panicles or axillary fascicles), free petals (vs. basally fused), no nectar glands (vs. often present), and well-developed and near S-shaped gynophore (vs. absent or short and straight); from Koeberliniaceae it differs also by the lack of thorns (vs. present), solitary flowers in bract axils (vs. axillary umbel-like racemes), fused sepals (vs. free), sessile petals (vs. shortly clawed), four stamens (vs. eight, rarely ten), no separate nectar glands (vs. present), and two ovules per locule (vs. many). 

As families, Tiganophytaceae, Bataceae and Koeberliniaceae are morphologically distinct. However, our molecular evidence indicates that Bataceae are nested in Salvadoraceae (also Sun et al. 2016), making Salvadoraceae paraphyletic, but data on more taxa are needed to fully resolve the possible relationships among these families. A phylogenetic analysis of Brassicales inferred from 72 plastid genes by Edger et al. (2018) showed Salvadoraceae and Bataceae to be sisters, but this is of little significance for our use as it was based on a limited sampling of Salvadoraceae, with both Dobera and Azima absent. From a practical point of view, it would serve little purpose to create heterogeneous families with little or no predictive value, although some may argue that monotypic families do little in the way of summarizing information, perhaps preferring to opt for subfamily or tribal status. Considering available evidence for these families, indications are that the largest one, Salvadoraceae, is heterogeneous as currently circumscribed. For example, Azima is, amongst others, morphologically and anatomically distinct from other members of the family (e.g. Takhtajan 2009), and in the past has been placed in a family of its own, namely Azimaceae (Wight & Gardner 1845). However, Azima does share some morphological features with Batis, notably the possession of unisexual flowers (Ronse De Craene 2005) and an ovary with a false septum, albeit only an apical one (Kshetrapal 1970), as is also present in Dobera (Ronse De Craene & Wanntop 2009). Further studies should consider, amongst others, the possible reinstatement of Azimaceae, but alternatively it may be better to accommodate Azima in an expanded Bataceae or to subsume Bataceae in an expanded Salvadoraceae.


Tiganophyton Swanepoel, F.Forest & A.E.van Wyk, gen. nov. 

Tiganophyton karasense Swanepoel, F.Forest & A.E.van Wyk, sp. nov. 

Type:— NAMIBIA. Karas Region: Groot Pan, 38 km northeast of Tses along road, on edge of pan, 2518CB, 1030 m, 19 December 2010, Swanepoel 365 (holotype WIND; isotypes PRE, PRU).


FIGURE 5. Landsat image on which is shown the village of Tses in Namibia and the three seasonal pans (coloured green) from where Tiganophyton karasense is known at present: A = Groot Pan; B = Kleinvaalgras Pan; C = Pan at Middelplaas. These pans receive their drainage from the calcrete-covered Weissrand Plateau, the extensive palely coloured area dotted with darkly coloured depressions (dayas). Linear aeolian dunes of the Kalahari (KD) are visible in the upper right-hand corner of the image and believed to have covered the now exposed Weissrand Plateau in the distant past. Image: NASA, based on a tri-decadal global Landsat 7 orthorectified ETM+ Pan-sharpened image.

FIGURE 4. Topographical map showing the known distribution (black dots) of Tiganophyton karasense in southeastern Namibia. The insert shows a map of southern Africa with names of countries; the grey rectangle indicates the area depicted by the topographical map.

Conservation status:— Tiganophyton karasense is rare and localized with only three locations known. It should be considered as Vulnerable (VU D1) due to its small population size, the latter estimated to number fewer than 1000 mature individuals (IUCN 2012). 

Etymology:— Tiganophyton is derived from the Greek τηγάνι, tigani, a frying pan, referring to the habitat of this species, which can be extremely hot, and φυτών, fyton, a plant. The specific epithet “karasense” denotes the Karas Region in southern Namibia, where all known localities of the new species are located.

FIGURE 1. Portion of the Brassicales phylogenetic tree based on three plastid (ndhF, matK and rbcL) and one mitochondrial (matR) markers. The core Brassicales clades comprise samples from Brassicaceae, Capparaceae, Cleomaceae, Resedaceae, Gyrostemonaceae, Pentadiplandraceae, Tovariaceae, and Emblingiaceae. Numbers on nodes are bootstrap percentages from the RAxML analysis.


Wessel Swanepoel, Mark W. Chase, Maarten J.M. Christenhusz, Olivier Maurin, Félix Forest and Abraham E. E. van Wyk. 2020. From the Frying Pan: An Unusual Dwarf Shrub from Namibia Turns Out To Be A New Brassicalean Family. Phytotaxa. 439(3); 171–185. DOI: 10.11646/phytotaxa.439.3.1


[Botany • 2020] Asplenium normale f. scythiforme (Aspleniaceae) • New Addition to the Asplenium normale complex: An Endemic forma in Taiwan

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Asplenium normale f. scythiforme  Z.X. Chang

in Chang, Kuo, Lu & Huang, 2020
  鐮羽鐵角蕨  || Taiwania.ntu.edu.tw
(Photos by Pi-Fong Lu & Zhi-Xiang Chang)

Abstract
Evolutionary histories of species complexes in ferns are usually complicated with hybridization and polyploidization. In the Asplenium normale D.Don complex, we here identify a new taxon - Asplenium normale f. scythiformeZ.X. Chang, f. nov., by clarifying its position in the reticulated tree of the species complex. Our phylogenetic and flow cytometric results surprisingly support that this new taxon is a non-hybridized diploid and conspecific with A. normale. Nonetheless, the forma scythiforme can be separated from the normale by having more dissected and falcate pinnae with apices acuminate to fishbone-like tails. Currently, A. normale f. scythiforme was found to be endemic to Taiwan with only one northern and one southern populations.

Keyword: Asplenium normale f. scythiforme, Asplenium normale complex, flow cytometry, morphology, phylogenetic

Fig. 1.  Asplenium normale f. scythiforme Z-X Chang.
A. Habitat. B. Buds. C. Adaxial side of leaf. D. Abaxial side of leaf.

Scale bar: A = 10 cm; B = 5 cm; C = 1 cm; D = 1 cm. 
(Photos A, B provided by Pi-Fong Lu; Photos C, D provided by Zhi-Xiang Chang)

Asplenium normale f. scythiforme Z.X. Chang, f. nov. 
鐮羽鐵角蕨

Distribution: This forma is currently known with only two small populations that grow in Chamaecyparis montane mixed cloud forest and PasaniaElaeocarpus montane evergreen broad-leaved cloud forest (Li et al., 2013) in northern and southern Taiwan respectively, and coexists with Asplenium normale f. normale. We speculate that the local populations have propagated asexually with vegetative buds. 

Etymology: The ‘‘scythiforme’’ means the pinnae shape like the scythe, which was used to mow the grass. 

Note: Since 2007, we have never seen any individuals that producing fertile leaves in wild as well as three-year planted individuals in the Dr. Cecilia Koo Botanic Conservation Center (KBCC).  


Zhi-Xiang Chang, Li-Yaung Kuo, Pi-Fong Lu and Yao-Moan Huang. 2020. New Addition to the Asplenium normale complex (Aspleniaceae): An Endemic forma in Taiwan. Taiwania. 65(2); .253-260. 

[Ichthyology • 2019] Jenynsia sulfurica • Molecular and Morphological Convergence to Sulfide-tolerant Fishes in A New Species of Jenynsia (Cyprinodontiformes: Anablepidae), the First Extremophile Member of the Family

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 Jenynsia sulfurica 
Aguilera, Terán, Mirande, Alonso, Rometsch, Meyer & Torres-Dowdall, 2019

  DOI: 10.1371/journal.pone.0218810

Abstract
Freshwater sulfide springs have extreme environmental conditions that only few vertebrate species can tolerate. These species often develop a series of morphological and molecular adaptations to cope with the challenges of life under the toxic and hypoxic conditions of sulfide springs. In this paper, we described a new fish species of the genus Jenynsia, Anablepidae, from a sulfide spring in Northwestern Argentina, the first in the family known from such extreme environment. Jenynsia sulfurica n. sp. is diagnosable by the lack of scales on the pre-pelvic area or the presence of a single row of scales, continuous or not, from the isthmus to the bases of the pelvic fins. Additionally, it presents a series of morphological and molecular characteristics that appear convergent with those seen in other fish species (e.g., Poeciliids) inhabiting sulfide springs. Most notably, J. sulfurica has an enlarged head and postorbital area compared to other fish of the genus and a prognathous lower jaw with a hypertrophied lip, thought to facilitate respiration at the air-water interface. Analyses of cox1 sequence showed that J. sulfurica has two unique mutations resulting in amino acid substitutions convergent to those seen in Poeciliids from sulfide springs and known to provide a physiological mechanism related to living in sulfide environments. A phylogenetic analysis, including molecular and morphological characters, placed J. sulfurica as sister taxa to J. alternimaculata, a species found in nearby, non-sulfide habitats directly connected to the sulfide springs. Thus, it can be inferred that the selection imposed by the presence of H2S has resulted in the divergence between these two species and has potentially served as a barrier to gene flow.

 Fig 2. Live specimens of the sulfide-tolerant species Jenynsia sulfurica sp. nov. 
Lateral view of a (A) male and (B) female individual, exhibiting large heads and a prognathous lower jaw with a hypertrophied lip (indicated by arrows) which facilitate respiration at the air-water interface. (C) dorsal and (D) ventral view of a female individual.

Fig 1. Preserved holotype and paratype specimens of Jenynsia sulfurica sp. nov. Above: holotype CI-FML 7286, male, 21.6 mm SL; below: paratype CI-FML: 7287, female, 32.8 mm SL, from the La Quinta lagoon, Santa Barbara department, Jujuy province, Argentina.



Jenynsia sulfurica, new species

Diagnosis
The genus Jenynsia is subdivided into two subgenera, one containing five species only known from inland habitats in Brazil (Plesiojenynsia) and a more widely distributed subgenus including nine previously described species (Jenynsia). The new species herein described (Fig 1) presents the three synapomorphies considered by Ghedotti [1998] as diagnostic for the subgenus Jenynsia: (1) a modified sixth anal-fin ray segmented on its proximal quarter; (2) unsegmented on its distal quarter in adult males and (3) the vertically inclined proximal radials associated with the first six anal-fin rays in the gonopodium. Also, in the analyses under both, equal and implied weightings, the additional synapomorphies proposed by Aguilera et al. [2013] for the subgenus Jenynsia were recovered (i.e. character state 17–1; 47–1; 51–1 and 64–2; S1 Table). In the new species herein described, character 64 is reversed to state 0 (S1 Table).

The new species is diagnosable from all other species of the genus by the absence of scales on the ventral surface of the body or the presence of a single row of scales, continuous or not, from the isthmus to the pelvic-fin bases (vs. completely scaled ventral surface of body in all species of Jenynsia; Fig 3). Additionally, J. sulfurica presents a unique coloration pattern, exhibiting eight to eleven irregular blotches along the mid-lateral surface of the body. These are formed by dark-brown chromatophores, ranging from rounded spots to vertical bars spreading up to three scales in depth (vs. different configuration pattern; Fig 1).


Etymology: The specific epithet “sulfurica” is a Spanish adjective, meaning “related to sulfur or from the sulfur”. In this case refers to the environment rich in sulfur that this species inhabits.

Distribution: Jenynsia sulfurica is currently only known from Laguna La Quinta, which is part of a thermal system in the western flank of the Santa Bárbara hills, Santa Bárbara Department, Jujuy Province, Northwestern Argentina (Fig 5). It connects to the San Francisco River, tributary of the Bermejo River in the Paraná River basin.

Fig 6. Photographs of the habitat of Jenynsia sulfurica sp. nov. 
(A) the lagoon and (B) the sulfide spring which drains into the lagoon. (C) Pond of more than 10 cm water depth where adults of J. sulfurica were found and (D) small pond of 2 cm water depth inhabited by juveniles of J. sulfurica.

Fig 5. Hydrological map of South America. Red rectangle highlights the Province of Jujuy, where the type locality of Jenynsia sulfurica sp. nov. is indicated by a red dot. (Digital map from catalog.data.gov, U.S. Government Works subject to no copyright).

    

Conclusions: 
So far, fishes of only four taxonomic families were known to have representatives in freshwater sulfide springs: Poeciliidae, Cyprinodontidae, Rivulidae (all Cyprinodontiformes), and Synbranchidae (Synbranchiformes). Moreover, only six of these species are endemic to sulfide springs (i.e., Cyprinodon bobmilleri, Aphanius ginaonis, Gambusia eurystoma, Limia sulphurophila, Poecilia sulphuraria, and P. thermalis). Jenynsia sulfurica is the first species of the genus Jenynsia, and the only species within Anablepidae currently known to inhabit sulfide springs, a very extreme freshwater environment. Moreover, Jenynsia sulfurica is the first microendemism within the genus, being present only in a small sulfide thermal spring in Northwestern Argentina.

Members of the order Cyprinodontiformes are in general highly tolerant to high temperatures, different concentrations of salinity, and a wide range of physicochemical environmental conditions, including environments with high concentrations of sulfide. In the genus Jenynsia, only a few studies were conducted to evaluate the tolerance of these fish to different environmental conditions, and almost all focused on J. lineata (= J. multidentata). This species is considered to be highly tolerant (e.g., euryhaline, eurythermic and euryoic), as it is commonly found to inhabit a wide range of abiotic conditions. Although there are no studies in the remaining species of the genus, it is possible that closely related species also show high tolerance to variation in different abiotic factors. This is in line with the pattern of diversity within the genus, where different species are found across drainages (i.e., in the absence of gene flow) rather than within drainages (i.e., in the presence of gene flow). Thus, Jenynsia sulfurica is, from an ecological and an evolutionary perspective, an interesting species that attests to the extreme conditions of H2S enriched environments.


 Gastón Aguilera, Guillermo Enrique Terán, Juan Marcos Mirande, Felipe Alonso, Sina Rometsch, Axel Meyer and Julian Torres-Dowdall. 2019. Molecular and Morphological Convergence to Sulfide-tolerant Fishes in A New Species of Jenynsia (Cyprinodontiformes: Anablepidae), the First Extremophile Member of the Family. PLoS ONE. 14(7): e0218810. DOI: 10.1371/journal.pone.0218810


[Herpetology • 2020] Physalaemus claptoni • A New Species of the Physalemus deimaticus Group (Anura, Leptodactylidae) [Amphibians from Serra do Cipó, Minas Gerais, Brasil. VI]

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Physalaemus claptoni
Leal, Leite, Costa, Nascimento & Garcia, 2020


Abstract
We describe a new species of Physalaemus assigned to the Physalaemus signifer Clade, and it is morphologically similar to P. rupestris, from the highlands of the Serra do Cipó in the southern Espinhaço Range, State of Minas Gerais, Southeastern Brazil. The new species is diagnosed by using the following combination of character states: presence of an arrow-shaped blotch on the dorsum of body; presence of a median longitudinal light stripe over urostyle region; belly and ventral surface of thigh marbled with dark gray irregularly shaped blotches on a bluish background; absence of reddish coloration over axillary and inguinal regions in live individuals; bright orange dots scattered over head, upper lip, and dorsum of body in live individuals; ventral surface of hand and foot red in live individuals; small size (adult male SVL=16.2–18.2 mm); presence of brown, not divided, nuptial pad in males; END/ED in males ranging from 0.85–0.93; supernumerary tubercles on foot absent; tarsal fold absent; tarsal tubercle absent; texture of posterior region of belly and ventral surface of thigh smooth; advertisement call composed of two note types (note A + B); advertisement call duration of 0.80–1.28 s; note A with ascending amplitude until mid-note then descending towards the end of the note; note B with pulses arranged in 5–7 groups; and dominant frequency of note A from 1734.4–2765.6 Hz and of note B from 1507.3–2859.4 Hz. A phylogenetic analysis based on mitochondrial DNA sequences recovered the new species nested within the Physalaemus deimaticus species group. Additionally, we redescribe the call of Physalaemus rupestris and provide a review of the geographic distribution and conservation status of the species belonging to the P. deimaticus species group.

Keywords: Amphibia, Advertisement call; Campo rupestre; Espinhaço Range; Phylogeny; Physalaemus rupestris; Taxonomy



Physalaemus claptoni


Fernando Leal, Felipe S. F. Leite, William P. da Costa, Luciana B. Nascimento and Paulo C. A. Garcia. 2020. Amphibians from Serra do Cipó, Minas Gerais, Brasil. VI: A New Species of the Physalemus deimaticus Group (Anura, Leptodactylidae). Zootaxa. 4766(2); 306–330. DOI: 10.11646/zootaxa.4766.2.3

[Crustacea • 2020] Calcipotamon puglabrum • A New Long-legged Terrestrial Freshwater Crab (Decapoda: Potamidae) from Hainan Island, China

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Calcipotamon puglabrum
C. Huang, S.-Z. Huang & Shen, 2020


Abstract
A new genus and new species of terrestrial freshwater crab, Calcipotamon puglabrum gen. nov. et sp. nov., is described from the limestone forests of Changjiang, Hainan Island, China, based on morphology and mitochondrial 16S rDNA sequences. The new genus is closest to Neotiwaripotamon Dai & Naiyanetr, 1994, and Tiwaripotamon Bott, 1970, but differs in a combination of carapace, third maxilliped, ambulatory leg and male gonopod characters. Molecular analysis shows that the new genus is closely related with but not clustered within other Hainan potamid genera. Notes on the general biology of this new species are also provided.

Keywords: Crustacea, freshwater crab, Hainan, new genus, new species, Potamidae, systematics



Calcipotamon puglabrum gen. nov. et sp. nov.


Chao Huang, Sheng-Zhuo Huang and Zhi-Xin Shen. 2020. A New Long-legged Terrestrial Freshwater Crab, Calcipotamon puglabrum gen. nov. et sp. nov. (Crustacea: Decapoda: Potamidae), from Hainan Island, China. Zootaxa. 4766(3); 447–456. DOI: 10.11646/zootaxa.4766.3.4

[Herpetology • 2020] Macrocalamus emas • Systematics and Natural History of Mountain Reed Snakes (Genus Macrocalamus; Calamariinae)

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Macrocalamus emas 
Quah, Anuar, Grismer, Wood, Jr & Azizah, 2020

Golden-bellied Reed Snake  ||  DOI:  10.1093/zoolinnean/zlz092/5614987 
Photographs by Evan Quah

Abstract
The first molecular phylogeny for mountain reed snakes (genus Macrocalamus) based on the mitochondrial gene cytochrome b is not entirely consistent with the previous taxonomy based on morphology and colour pattern. Macrocalamus chanardi is shown to be a species complex composed of three different allopatric lineages distributed across different upland areas in Peninsular Malaysia that are morphologically conserved but genetically distinct. A new and morphologically different species, Macrocalamus emas sp. nov., is described from the Cameron Highlands, Pahang, Peninsular Malaysia. It occurs in sympatry with four other ecologically equivalent species of Macrocalamus and one other species of Collorhabdium. The phylogeographical pattern of sympatric genetically distinct species of Macrocalamus endemic to upland areas is attributed to the fossorial nature of these snakes and the montane forest expansion and retraction resulting from cyclical, glacioeustatically driven climatic processes that have reconstructed the geography of Sundaland continuously over the last 25 Myr.

Keywords: biogeography, Colubridae, cytochrome b, montane, phyleography, reptile, Southeast Asia, Squamata

  dorsum and venter of the holotype of Macrocalamus emas (USMHC 1866) from Gunung Brinchang, Cameron Highlands, Pahang.
Photographs by Evan Quah.




dorsum of male paratype of Macrocalamus emas (USMHC 1957) from Gunung Brinchang, Cameron Highlands, Pahang.
 Photograph by Evan Quah.

Macrocalamus emas Quah, Anuar, Grismer, Wood, Jr & Azizah sp. nov. 
Golden-bellied Reed Snake

Etymology: The specific epithet ‘emas’ is the Malay word for ‘gold’, in reference to the colour of the venter, which is bright, golden yellow in life.


Evan S. H. Quah, Shahrul Anuar, Lee L. Grismer, Perry L. Wood, Jr. and Siti Azizah Mohd Nor. 2020. Systematics and Natural History of Mountain Reed Snakes (Genus Macrocalamus; Calamariinae). Zoological Journal of the Linnean Society. 188(4); 1236–1276. DOI:  10.1093/zoolinnean/zlz092/5614987 

      

[Invertebrate • 2020] Pseudorhabdosynochus kasetsartensis (Monogenea: Diplectanidae) from the Cloudy Grouper Epinephelus erythrurus (Valenciennes) (Perciformes: Serranidae) in the lower Gulf of Thailand

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Pseudorhabdosynochus kasetsartensis 
Saengpheng & Purivirojkul, 2020

Abstract
Pseudorhabdosynochus kasetsartensis n. sp. is described from the gills of the cloudy grouper Epinephelus erythrurus (Valenciennes) caught in the lower Gulf of Thailand. The new species is distinguished from other species assigned to the genus by the structure of its sclerotised vagina which has a wide and prominent sclerotised trumpet, long, thin, coiled or curved primary canal, short secondary canal, and primary and secondary chambers that are blind extremities of the primary and secondary canals, respectively. This is the first species of Pseudorhabdosynochus Yamaguti, 1958 described from E. erythrurus and the first record of a species of Pseudorhabdosynochus in Thailand.

Pseudorhabdosynochus kasetsartensis n. sp.
A, Composite drawing (mainly from the holotype), ventral view; B, Male quadriloculate organ, ventral view; C, Sclerotised vagina, ventral view; D, Dorsal hamulus; E, Ventral hamulus; F, Dorsal bar; G, Ventral bar; H, Squamodisc.
 Scale-bars: A, 200 µm; B–H, 50 µm


Pseudorhabdosynochus kasetsartensis n. sp.

Type-host:Epinephelus erythrurus (Valenciennes) (Perciformes: Serranidae).

Type-locality: The lower Gulf of Thailand (...), October 2018.

Site in host: Gills.

Prevalence and intensity: 100% (30/30); mean intensity: 38 individuals/fish (1,140/30).

Etymology: The species name honors Kasetsart University and the Kasetsart University Research and Development Institute, the institute that has funded our aquatic parasitology studies for many years.



Chompunooch Saengpheng and Watchariya Purivirojkul. 2020. Pseudorhabdosynochus kasetsartensis n. sp. (Monogenea: Diplectanidae) from the Cloudy Grouper Epinephelus erythrurus (Valenciennes) (Perciformes: Serranidae) in the lower Gulf of Thailand. Systematic Parasitology. 97(1); 99–106.  DOI:  10.1007/s11230-019-09899-z


[Herpetology • 2020] Persiophis fahimii • Additions to the Phylogeny of Colubrine Snakes in Southwestern Asia, with Description of A New Genus and Species (Serpentes: Colubridae: Colubrinae)

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Persiophis fahimii
Rajabizadeh, Pyron, Nazarov​, Poyarkov, Adriaens & Herrel, 2020

Fahimi’s Ground Snake  ||  DOI: 10.7717/peerj.9016
Photos by Roman A. Nazarov.

Abstract
Reptiles are still being described worldwide at a pace of hundreds of species a year. While many discoveries are from remote tropical areas, biodiverse arid regions still harbor many novel taxa. Here, we present an updated phylogeny of colubrid snakes from the Western Palearctic by analyzing a supermatrix of all available global snake species with molecular data and report on the discovery of a new genus and species of colubrine snake from southeastern Iran. The new taxon, named Persiophis fahimii gen. et sp. nov., is nested within a clade containing Middle Eastern and South Asian ground racers (Lytorhynchus, Rhynchocalamus, Wallaceophis, and Wallophis). This species has a derived morphology including an edentulous pterygoid and occurrence of short and blunt teeth on the palatine, maxillae and dentary bones, an elongated snout and a relatively trihedral first supralabial scale that is slightly bigger than the second, and elongated toward the tip of rostral. We also report on the osteology and phylogenetic placement of several poorly studied colubrines: Hierophis andreanus (reassigned to Dolichophis) and Muhtarophis barani.


    

Figure 3: The holotype of Persiophis fahimii gen. et sp. nov., live specimen in situ.
Details of head scalation in close-up (A) lateral, (B) ventral and (D) dorsal views; (C) lateral view of the fore body, and (E) dorsal view of the whole body.
Photos by Roman A. Nazarov.

Persiophis fahimii gen. et sp. nov. 

Diagnosis: For the genus and species, Persiophis fahimii is distinguished within the subfamily Colubrinae by a combination of distinct osteological characters, including the occurrence of vestigial teeth on the palatine; a thin, edentulous pterygoid; short and blunt teeth on the maxillae and dentary, occurrence of edentulous parts on the anterior and middle region of the maxillae; a fully fused basioccipital and basisphenoid; the occurrence of a highly oblique quadrate bone attached to the posterior tip of a somewhat elongated supratemporal. The genus and species are also distinguished within the subfamily Colubrinae by a combination of morphological characters, including an elongated snout; occurrence of a rostral scale that is visible from above and wedged between the internasals; a relatively trihedral first supralabial that is slightly bigger than the second and elongated toward the tip of rostral; 15 longitudinal rows of dorsal scales on midbody; and an edentulous pterygoid.


Figure 5: Habitat of  Persiophis fahimii gen. et sp. nov. at the type locality in vicinity of Orzueeyeh City, Kerman Province, Southern Iran.
(A) Macrohabitat, arrow indicates the place where the snake was collected; (B) microhabitat at the site of collection of the type specimen.
Photos by Mahdi Rajabizadeh.

    

Natural history: Our data on biology of Persiophis fahimii is based on the one specimen collected. The holotype was collected at elevation of 1,350 m ASL on a bare mountainside, while climbing on a vertical rocky wall, at late night (2.30 AM). The mountain is composed of Devonian limestone marbles, at the southeastern edge of the central mountains of Iran, ranging from 1,050 to 1,600 m ASL. Dominant vegetation on the plain in front of the mountain is Calligonum and annual forbs and grasses. At the base of the mountain, the vegetation changes to Calligonum and Ziziphus nummularia. At the type locality, the vegetation is dominated by sparse woody, thorny or aromatic shrubs, including Periploca sp. (Apocynaceae), Dichanthium sp. (Poaceae), Fagonia sp. (Zygophyllaceae), Ephedra foliata (Ephedraceae), Teucrium sp. (Lamiaceae), Lophochloa sp. (Poaceae), Lycium sp. (Solanaceae), Tribulus sp. (Zygophyllaceae), Pulicaria sp. (Asteraceae), Reseda sp. (Resedaceae), Heliotropium sp. (Boraginaceae), Gymnocarpos decander (Caryophyllaceae), Convolvulus sp. (Convolvulaceae), Heliantemum sp. (Cistaceae), and Diceratella persica (Apiaceae).

 Etymology: The genus name is a latinized noun in masculine gender derived from the Greek words “Persi-” (Persís) = Persia (old name of Iran) and “ophis” = serpent. The species is named after Dr. Hadi Fahimi, a young naturalist and herpetologist who dedicated his life to studying the biodiversity and conservation of reptiles and mammals of Iran. As a young nature lover, Hadi joined the rangers of the Department of Environment in Kerman province for two years and served partly in Khabr National Park where is close to the type locality of Persiophis fahimii. He was a Ph.D. student in IAU, Tehran, studying on the conservation of black bears in southeastern Iran, but sadly passed away in an aircraft crash in Dena Mountain in central Zagros in February 2018. We suggest the common name “Fahimi’s Ground Snake” in English for the new species.


Conclusions: 
Here, we present new molecular sequence data and a new phylogenetic analysis of snakes, focusing primarily on Colubrinae from southwestern Asia. We find continued uncertainty in the placement of the enigmatic Turkish genus Muhtarophis based on osteological comparisons, despite strong support in the phylogenetic analysis. On the basis of the tree and morphology, we confidently reassign Hierophis andreanus from Hierophis to Dolichophis, hereafter referred to Dolichophis andreanus. Our morphological and molecular data also suggest a potential instance of convergent miniaturization in these Old-World racers. Finally, we report on the discovery of a new genus and species of ground snake, Persiophis fahimii, from southeastern Iran. Our data highlight the importance of broad phylogenetic sampling and ground-level field research to gather an accurate picture of global biodiversity, phylogenetic relationships, and evolutionary patterns in groups such as snakes.


Mahdi Rajabizadeh, R. Alexander Pyron, Roman Nazarov​, Nikolay A. Poyarkov, Dominique Adriaens and Anthony Herrel. 2020. Additions to the Phylogeny of Colubrine Snakes in Southwestern Asia, with Description of A New Genus and Species (Serpentes: Colubridae: Colubrinae). PeerJ. 8:e9016. DOI: 10.7717/peerj.9016

    


[Botany • 2020] Phylogenetics of the Mycoheterotrophic Genus Thismia (Thismiaceae: Dioscoreales) with A Focus on the Old World Taxa: Delineation of Novel Natural Groups and Insights Into the Evolution of Morphological Traits

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Thismia spp.

in Shepeleva, Schelkunov, Hroneš, Sochor, Dančák, Merckx, Kikuchi, Chantanaorrapint, Suetsugu, et al., 2020. 

Abstract
Thismia is a genus of > 80 mycoheterotrophic species characterized by a peculiar appearance and complex floral morphology. A significant proportion of the species and morphological diversity of Thismia has only been uncovered in the past two decades, and new discoveries continue to be made. Given that many new data have recently become available, and the most comprehensive taxonomic revision of the genus from 1938 addresses less than half of the currently known species, previous hypotheses for species relationships and infrageneric taxonomic classification in Thismia was in need of review. Extensive molecular phylogenetic studies of Thismia at the genus level have never been presented. We investigate the phylogenetic relationships of 41 species (and one variety) of Thismia from the Old World. Our study comprises 68 specimens (for 28 of which the data were newly generated), including outgroup taxa broadly representing Thismiaceae (= Burmanniaceae p.p. sensuAPG IV, 2016), and is based on two nuclear and one mitochondrial marker. We use maximum likelihood and Bayesian inference to infer relationships among the taxa. We also constructed a morphological dataset of 12 mostly floral characters, comparing these characters to hypotheses based on molecular evidence to identify putative synapomorphies for major clades and to discuss hypotheses regarding the evolution of structural traits in the genus. Our analyses indicate that the majority of currently accepted infrageneric taxa of Thismia are polyphyletic. We find support for the monophyly of the Old World group, in which we recognize five well-supported lineages (clades); the only New World species studied appears to be related to the Neotropical genus Tiputinia. Ancestral state reconstructions demonstrate that the evolution of most morphological characters was homoplastic, but we identify characters that provide each of the five clades of Old World Thismia with a unique morphological description. The geographical distribution of the species under study is also shown to be consistent with the major clades. Our investigation provides a phylogenetic basis for the development of a novel sectional classification of Thismia reflecting morphological and geographical traits.

Keywords: floral traits, high-throughput sequencing, molecular phylogenetics, monocots, non-photosynthetic plants, South-East Asia



Ekaterina A. Shepeleva, Mikhail I. Schelkunov, Michal Hroneš, Michal Sochor, Martin Dančák, Vincent Sft Merckx, Izai Abs Kikuchi, Sahut Chantanaorrapint, Kenji Suetsugu, Hirokazu Tsukaya, Shek S. Mar, Hong Truong Luu, Hong-Qing Li, Maria D. Logacheva and Maxim S. Nuraliev. 2020. Phylogenetics of the Mycoheterotrophic Genus Thismia (Thismiaceae: Dioscoreales) with A Focus on the Old World Taxa: Delineation of Novel Natural Groups and Insights Into the Evolution of Morphological Traits. Botanical Journal of the Linnean Society. boaa017. DOI: 10.1093/botlinnean/boaa017  


[PaleoMammalogy • 2020] Scaphokogia totajpe • A New Bulky-faced Pygmy Sperm Whale (Kogiidae) from the late Miocene of Peru

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 Scaphokogia totajpe
Benites-Palomino, Vélez-Juarbe, Salas-Gismondi & Urbina, 2020

Illustration by Jaime Bran  twitter.com/BranArtworks

ABSTRACT
The modern pygmy and dwarf sperm whales (Physeteroidea, Kogiidae) are remnants of a highly diverse group, which flourished in the Miocene oceans. Unlike their modern suction-feeding, deep-diving relatives, the past diversity of this family includes animals with disparate ecological habits. Here, we describeScaphokogia totajpe, sp. nov., a new species of kogiid based on a well-preserved skull from the upper Miocene strata of the Pisco Formation, Peru. A phylogenetic analysis places S. totajpe as sister taxon of S. cochlearis and divides Kogiidae into two clades: the first including both species of Scaphokogia and the second including Kogia, Koristocetus, Praekogia, and Nanokogia. Similar to S. cochlearis, S. totajpe has a tubular rostrum with a hypertrophied mesorostral canal, a large supracranial basin, and a leftward deviated facial sagittal crest, but it differs by possessing a proportionately shorter rostrum, a reduced projection of the lacrimojugal between the frontal and the maxilla, and a flat occipital shield. The cranial morphology of Scaphokogia indicates that the extent of the nasal complex was greater than in modern kogiids. Furthermore, the overall rostrum shape and the reconstructed muscle insertion sites indicate that Scaphokogia retained some plesiomorphic features related to a more generalist ecology. Inclusion of S. totajpe into the context of the Pisco Formation indicates that during the late Miocene, the Peruvian coastal system was a hot spot for the diversification of physeteroids, with at least four species coexisting. Finally, Scaphokogia totajpe highlights a late Miocene diversity peak for sperm whales in the global oceans, before the Pliocene odontocete turnover.








Aldo Benites-Palomino, Jorge Vélez-Juarbe, Rodolfo Salas-Gismondi and Mario Urbina. 2020. Scaphokogia totajpe, sp. nov., A New Bulky-faced Pygmy Sperm Whale (Kogiidae) from the late Miocene of Peru. Journal of Vertebrate Paleontology.  e1728538.  DOI: 10.1080/02724634.2019.1728538 


[Botany • 2020] Hohenbergia ituberaensis (Bromeliaceae) • A New White-flowered Species from Bahia, Brazil

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Hohenbergia ituberaensis
in Cavalcante, Souza, Versieux & Martinelli. 2020. 

Abstract
We describe a new species of Hohenbergia (Bromeliaceae) from Brazil, Hohenbergia ituberaensis, a rare species, so far only known from Ituberá municipality, Bahia State, in an area of the Atlantic Forest. The species is similar to H. stellata, presenting a pinkish inflorescence, congested and non-divided branches, pinkish and large floral bracts hiding the sepals, spatulate petals with a slightly reflexed apex. However, it differs by the white petals, as a diagnostic characteristic. The type specimen was collected in a small forest fragment and here this species is categorized as Vulnerable. Additionally, we compared this new species to Hohenbergia belemii and H. capitata, which are also similar to H. stellata, due to the red/pinkish characteristics of the branches, with large flowers and well-developed floral bracts. An illustration, an occurrence map, taxonomic comments and a table comparing the main characters of these four species are provided.

Keywords: Atlantic Forest, Bromelioideae, Hohenbergia stellata, Monocots



Brayan Paiva Cavalcante, Everton Hilo De Souza, Leonardo M. Versieux and Adriana Pinheiro Martinelli. 2020. Hohenbergia ituberaensis (Bromeliaceae): A New White-flowered Species from Bahia, Brazil. Phytotaxa. 439(2); 119–126. DOI: 10.11646/phytotaxa.439.2.2


[Mammalogy • 2020] Evolutionary Relationships and Population Genetics of the Afrotropical Leaf-nosed Bats (Chiroptera, Hipposideridae: Doryrhina, Hipposideros & Macronycteris)

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in Patterson, Webala, Lavery, et al., 2020. 
Photo by B. D. Patterson / Field Museum

Abstract
The Old World leaf-nosed bats (Hipposideridae) are aerial and gleaning insectivores that occur throughout the Paleotropics. Both their taxonomic and phylogenetic histories are confused. Until recently, the family included genera now allocated to the Rhinonycteridae and was recognized as a subfamily of Rhinolophidae. Evidence that Hipposideridae diverged from both Rhinolophidae and Rhinonycteridae in the Eocene confirmed their family rank, but their intrafamilial relationships remain poorly resolved. We examined genetic variation in the Afrotropical hipposiderids Doryrhina, Hipposideros, and Macronycteris using relatively dense taxon-sampling throughout East Africa and neighboring regions. Variation in both mitochondrial (cyt-b) and four nuclear intron sequences (ACOX2, COPS, ROGDI, STAT5) were analyzed using both maximum likelihood and Bayesian inference methods. We used intron sequences and the lineage delimitation method BPP—a multilocus, multi-species coalescent approach—on supported mitochondrial clades to identify those acting as independent evolutionary lineages. The program StarBEAST was used on the intron sequences to produce a species tree of the sampled Afrotropical hipposiderids. All genetic analyses strongly support generic monophyly, with Doryrhina and Macronycteris as Afrotropical sister genera distinct from a Paleotropical Hipposideros; mitochondrial analyses interpose the genera Aselliscus, Coelops, and Asellia between these clades. Mitochondrial analyses also suggest at least two separate colonizations of Africa by Asian groups of Hipposideros, but the actual number and direction of faunal interchanges will hinge on placement of the unsampled African-Arabian species H. megalotis. Mitochondrial sequences further identify a large number of geographically structured clades within species of all three genera. However, in sharp contrast to this pattern, the four nuclear introns fail to distinguish many of these groups and their geographic structuring disappears. Various distinctive mitochondrial clades are consolidated in the intron-based gene trees and delimitation analyses, calling into question their evolutionary independence or else indicating their very recent divergence. At the same time, there is now compelling genetic evidence in both mitochondrial and nuclear sequences for several additional unnamed species among the Afrotropical Hipposideros. Conflicting appraisals of differentiation among the Afrotropical hipposiderids based on mitochondrial and nuclear loci must be adjudicated by large-scale integrative analyses of echolocation calls, quantitative morphology, and geometric morphometrics. Integrative analyses will also help to resolve the challenging taxonomic issues posed by the diversification of the many lineages associated with H. caffer and H. ruber.

Keywords: cryptic species, mtDNA, nuclear introns, Paleotropical, phylogeny, species delimitation, systematics



Figure 1. Type localities for Afrotropical hipposiderids: Doryrhina, blue symbols; Hipposideros, white symbols; Macronycteris, black symbols. Stars denote valid species, whereas circles indicate taxa considered as subspecies or synonyms. Localities are projected onto the biome map of Olson et al. (2001).
Taxa depicted are: Hipposideros abae J. A. Allen,1917; †Hipposideros (Pseudorhinolophus) amenhotepos Gunnell, Winkler, Miller, Head, El-Barkooky, Gawad, Sanders & Gingerich, 2015; Phyllorhina angolensis Seabra, 1898; Hipposideros caffer var. aurantiaca De Beaux, 1924; Hipposideros beatus K. Andersen, 1906; †Hipposideros besaoka Samonds, 2007; Phyllorrhina bicornis Heuglin, 1861; Hipposideros braima Monard, 1939; Hipposideros caffer Sundevall, 1846; Phyllorhina caffra Peters, 1852; Hipposideros camerunensis Eisentraut, 1956; Hipposideros caffer centralis K. Andersen, 1906; Rhinolophus Commersonii É. Geoffroy, 1813; Hipposideros cryptovalorona Goodman, Schoeman, Rakotoarivelo & Willows-Munro, 2016; Hipposideros curtus G. M. Allen, 1921; Phyllorrhina cyclops Temminck, 1853; Phyllorrhina fuliginosa Temminck, 1853; Hipposideros gigas gambiensis K. Andersen, 1906; Rhinolophus gigas Wagner, 1845; Phyllorrhina gracilis Peters, 1852; Hipposideros caffer guineensis K. Andersen, 1906; Hipposideros jonesi Hayman, 1947; †Hipposideros kaumbului Wesselman, 1984; Hipposideros lamottei Brosset, 1985; Hipposideros langi J. A. Allen, 1917; Hipposideros marisae Aellen, 1954; Phyllorhina Commersoni, var. marungensis Noack, 1887; Hipposideros beatus maximus Verschuren, 1957; Phyllorrhina megalotis Heuglin, 1861; Rhinolophus micaceus de Winton, 1897; Hipposideros Commersoni mostellum Thomas, 1904; Hipposideros nanus J. A. Allen, 1917; Hipposideros gigas niangarae J. A. Allen, 1917; Hipposideros caffer niapu J. A. Allen, 1917; Phyllorrhina rubra Noack, 1893; Hipposideros sandersoni Sanderson, 1937; Hipposideros tephrus Cabrera, 1906; Phyllorhina Commersoni, var. thomensis Bocage, 1891; Hipposideros gigas viegasi Monard, 1939; Phyllorhina vittata Peters, 1852.

One of the possibly three new to science bat species, previously referred to as Hipposideros caffer or Sundevall’s leaf-nosed bat
Photo by B. D. Patterson / Field Museum

A colony of what is apparently a new species of the genus Hipposideros found in an abandoned gold mine in Western Kenya
Photo by B. D. Patterson / Field Museum



 Bruce D. Patterson, Paul W. Webala, Tyrone H. Lavery, Bernard R. Agwanda, Steven M. Goodman, Julian C. Kerbis Peterhans and Terrence C. Demos. 2020. Evolutionary Relationships and Population Genetics of the Afrotropical Leaf-nosed Bats (Chiroptera, Hipposideridae). ZooKeys. 929: 117-161. DOI: 10.3897/zookeys.929.50240

Novel research on African bats pilots new ways in sharing and linking published data

    

[Botany • 2020] Crepidomanes shenzhenense (Subg. Crepidomanes; Hymenophyllaceae) • A New Filmy Fern Species from Guangdong, southern China

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Crepidomanes shenzhenense Wang Hui & X. Yun Wang

in Wang, Zhao, Ravi & Lu, 2020. 

Abstract
A new filmy fern, Crepidomanes shenzhenense (Hymenophyllaceae) is described from Shenzhen, Guangdong, southern China. Crepidomanes shenzhenense is a tiny fern characterized by having a broadly obovate lamina only with internal false veinlets and crenate to dissected margins of involucre lips. The new species is presently known from two localities in Shenzhen. The distinctiveness between the new species and three relevatives, C. parvifolium, C. megistostomum and C. latealatum complex, are presented in detail.

Keywords: Endangered species, filmy ferns, southern China, Pteridophytes

FIGURE 1. Crepidomanes shenzhenense Wang Hui & X. Yun Wang.
—A–B. Habits of the new species in situ.—C. Fronds with sori.—D–F. Sori from different individuals.—F. Internal false veinlets.—H. Portion of stipe showing hairs.

FIGURE 2. Crepidomanes shenzhenense Wang Hui & X. Yun Wang.
—A. Habit.—B. Portion of ultimate segment showing internal false veinlets and retused apex.— C. Internal false veinlets.—D. Hairs on the stipe.—E. Sorus with sporangia.—F. Sorus without sporangia.
(Drown by Cui Ding-han based on holotype)

Taxonomy 
Crepidomanes shenzhenense Wang Hui & X. Yun Wang, sp. nov. 

Diagnosis:— Crepidomanes shenzhenense resembles C. latealatum (van den Bosch 1863: 138) Copeland (1938: 60) but differs from the latter in having broadly obovate (vs. ovate to oblong or triangular) lamina, 1–4 (vs. 5–12) pairs of pinnae, involucre lips margin crenate to dissected (vs. entire), and sori only borne on the long acroscopic (vs. short acroscopic) segment .


Geographical distribution:— Crepidomanes shenzhenense is known only from two localities, Mt. Yangtaishan and Mt. Wutongshan, Shenzhen City, Guangdong, southern China, based on our fieldwork and herbarium investigations. 

Ecology:— Epilithic on wet granitic rock and cliff, near mountain stream in humid, under well shaded evergreen forest.

Etymology:— The specific epithet is from Shenzhen, a city located in southern China, where the new species was discovered.


Hui Wang, Guo-Hua Zhao, Baskaran Xavier Ravi and Shu-Gang Lu. 2020. Crepidomanes shenzhenense (Subg. Crepidomanes; Hymenophyllaceae), A New Filmy Fern Species from Guangdong, southern China. Phytotaxa. 440(2); 101–107. DOI: 10.11646/phytotaxa.440.2.2

 

[Botany • 2019] Crassothonna agaatbergensis (Asteraceae) • A New Species from the Skeleton Coast, Namibia

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Crassothonna agaatbergensis Swanepoel

in Swanepoel & De Cauwer, 2019.
Photographs by W. Swanepoel.

Abstract
Crassothonna agaatbergensis, here described as a new species, is known only from the northern part of the Skeleton Coast (part of the Namib Desert) in the Kaokoveld Centre of Endemism, northwestern Namibia. These perennial shrublets grow on basalt of the Agaatberg Mountain under harsh desert conditions. Diagnostic characters for C. agaatbergensis include the partially buried, globose, obovoid or ampulliform caudex and the inconspicuous rays which are much shorter than the involucre. A comparison of some of the more prominent morphological features to differentiate between C. agaatbergensis and its possible nearest relatives, C. clavifolia and C. protecta, is provided. Based on IUCN Red List categories and criteria, a conservation assessment of Endangered (EN D) is recommended for the new species.

Keywords: Agaatberg, endemism, flora, Gariep Centre of Endemism, Kaokoveld Centre of Endemism, Namib Desert, succulent, taxonomy 


FIGURE 1. Crassothonna agaatbergensis Swanepoel.
 A. caudex (obovoid), leaves, flowers and roots; B. caudex elongated into a long branch.
Photographs by W. Swanepoel.

     

FIGURE 2. Crassothonna agaatbergensis Swanepoel:
 capitulum at anthesis. A. side view; B. view from above.
Photographs by W. Swanepoel.

Crassothonna agaatbergensis Swanepoel, sp. nov. 

 Diagnosis:— Succulent shrublet up to 150 mm high, related to C. clavifolia and C. protecta, differing from C. clavifolia by leaves being cylindrical, botuliform, or in shorter leaves often clavate, 10–70 mm long, 2–7 mm diam. (3–6 times as long as broad) [vs. leaves in habitat grape-like, up to 15 mm long, 6–8 mm diam. (ca. twice as long as broad)], inflorescences simple or once to several times forked, bracts leaf-like, capitula 1–10, rays very short (a fifth to a quarter as long as involucre) [vs. inflorescences simple, bracts scale-like, capitula solitary, rays long (twice as long as involucre)]; from C. protecta by the caudex being globose, obovoid or ampulliform [vs. caudex slender, bottle-shaped or sausage-like], rays very short (a fifth to a quarter as long as involucre), not rolled backwards, with 1 or 2 green lines [vs. rays long (as long as involucre), soon rolled backwards, with 3 or 4 green lines]. 

FIGURE 3. Habitat of Crassothonna agaatbergensis on the Agaatberg Mountain.
Photograph by W. Swanepoel.

 Distribution and habitat:— At present Crassothonna agaatbergensis is known only from the Agaatberg Mountain 8 km to the east of Cape Fria, in the Skeleton Coast National Park (Figs. 3 & 4). This part of the Skeleton Coast National Park falls within the Namib Desert zone of the Kaokoveld Centre of Endemism, a biogeographical region known for its many restricted-range plants and animals, and extending from northwestern Namibia to southwestern Angola (Van Wyk & Smith 2001). Crassothonna agaatbergensis occurs approximately 8 km from the coast at elevations of 195– 225 m a.s.l. Average annual rainfall in the area is less than 50 mm, occurs in summer and is highly erratic. However, the area regularly receives fog from the bordering Atlantic Ocean (Mendelsohn et al. 2002). The Agaatberg Mountain, especially the higher ridges, clearly receives more precipitation from coastal fog than the surrounding hills and outcrops. This is evident by the occurrence of pockets of moss at the base of rocks and vertical areas, and the density of lichens which is markedly greater on the summits of the highest ridges. The new species occurs on the summits of two of the highest ridges of the Agaatberg Carbonatite Complex (Guj et al. 2011), separated by approximately 0.5 km, in small colonies of about twenty plants each (ca. seventy plants known). It grows on basalt in soil-filled rock fissures and among rocks on level and low vertical areas. Environmental conditions in the general area are extremely harsh, with low rainfall, high temperature variation and strong winds (calm for only 14% of the time as measured at Möwe Bay to the south (Mendelsohn et al. 2002)).

Etymology:— The specific epithet refers to the Agaatberg Mountain 8 km to the east of Cape Fria, in the Skeleton Coast National Park, Namibia. 

 Notes:— The nearest relatives of Crassothonna agaatbergensis appear to be C. clavifolia and C. protecta, species from which it differs in habit, branches, leaf and floral characters. Distribution ranges of the three species do not overlap; C. agaatbergensis occurs in the northern parts of the Namib Desert, in the Skeleton Coast National Park, C. clavifolia in the southern Namib in the Gariep Centre of Plant Endemism both in Namibia and South Africa (Van Wyk & Smith 2001) and C. protecta in the north-central Namib in Namibia to the Northern and Western Cape Provinces of South Africa (Nordenstam 2012). Some of the more prominent morphological features to distinguish between the three species are provided in Table 1.


Wessel Swanepoel and Vera De Cauwer. 2019. Crassothonna agaatbergensis (Asteraceae), A New Species from the Skeleton Coast, Namibia. Phytotaxa. 427(3); 209-215. DOI: 10.11646/phytotaxa.427.3.4

      

    

[PaleoMammalogy • 2020] Chlamyphractus dimartinoi • A New Fairy Armadillo (Cingulata, Chlamyphorinae) from the upper Miocene of Argentina: First Fossil Record of the most Enigmatic Xenarthra

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Right hemimandibles of fossil and extant chlamyphorines.
 A-C, Chlamyphractus dimartinoigen. et sp. nov., MMH-CH-87-7-100.  D-F, Chlamyphorus truncatus, CD-UNNE 1048.  G-I, Calyptophractus retusus, CML 03080. 

Chlamyphractus dimartinoi
Barasoain, Tomassini, Zurita,  Montalvo & Superina, 2020

 Reconstruction by P. Cuaranta.

ABSTRACT
Recent molecular analyses suggest that the evolutionary history of Cingulata (Xenarthra) could be more complex than believed previously. An ancient divergence was proposed for armadillos, recognizing two large monophyletic groups: Dasypodidae (including Dasypodinae) and Chlamyphoridae (including Euphractinae, Tolypeutinae, and Chlamyphorinae). Extant Chlamyphorinae (fairy armadillos) are among the most bizarre, elusive, and unknown mammals of the world. Here, we report the first accurate fossil record of this enigmatic xenarthran from the upper Miocene of the Argentine Pampas in southern South America, which represents a new genus and species (Chlamyphractus dimartinoi, gen. et sp. nov.). The phylogenetic analysis reflects the monophyly of the chlamyphorines. It is well supported by several unambiguous synapomorphies and includes the new fossil taxon as a sister group of the two extant species. This new taxon represents the most basal lineage among Chlamyphorinae and increases its diversity. The morphology of the forelimb suggests that it would have been a good digger, although, unlike extant species, it would not have had ‘fully’ subterranean habits.

FIGURE 2. Right hemimandibles of fossil and extant chlamyphorines.
A-C, Chlamyphractus dimartinoi, gen. et sp. nov., MMH-CH-87-7-100: A, labial view showing the angle between the horizontal and the vertical rami; B, lingual view; C, occlusal view.
 D-F, Chlamyphorus truncatus, CD-UNNE 1048: D, labial view showing the angle between the horizontal and the vertical rami; E, lingual view; F, occlusal view.
G-I, Calyptophractus retusus, CML 03080: G, labial view showing the angle between the horizontal and the vertical rami; H, lingual view; I, occlusal view.

SYSTEMATIC PALEONTOLOGY
Magnorder XENARTHRA Cope, 1889
Order CINGULATA Illiger, 1811

Family CHLAMYPHORIDAE Pocock, 1924
Subfamily CHLAMYPHORINAE Bonaparte, 1850

CHLAMYPHRACTUS, gen. nov.

Etymology— Chlamyphractus, from the Ancient Greek, Chlamy (alternative form of Chlamydo, meaning cloak, mantle) and phractus (derived from phraktos, meaning fortified, armored). It is a combination of names, considering the morphological resemblance to both extant genera of fairy armadillos (Chlamyphorus and Calyptophractus).

CHLAMYPHRACTUS DIMARTINOI, sp. nov.

Etymology— dimartinoi, in tribute to the late Vicente Di Martino, who carried out field work in the Arroyo Chasicó locality for many years and collected the specimen studied herein.


FIGURE 6. Rump plates of fossil and extant chlamyphorines.
A-C, Chlamyphractus dimartinoi, gen. et sp. nov., MMH-CH-87-7-100. Note the last band of fixed osteoderms fused to the rump plate. The features of these osteoderms are similar to the other isolated fixed osteoderms. A, posterior view; B, dorsal view; C, small fragments (lower margin?).
D, E, Chlamyphorus truncatus: D, bony surface, UNS-CTS1; E, surface covered by the keratinous coat, CD-UNNE 1048.
F, G, Calyptophractus retusus: F, bony surface, MACN 36874; G, surface covered by the keratinous coat, MACN 4110.

FIGURE 10. Reconstruction of Chlamyphractus dimartinoi, gen. et sp. nov., from the upper Miocene of the Argentine Pampas.
 drawn by P. Cuaranta.


Daniel Barasoain, Rodrigo L. Tomassini, Alfredo E. Zurita,Claudia I. Montalvo and Mariella Superina. 2020. A New Fairy Armadillo (Cingulata, Chlamyphorinae) from the upper Miocene of Argentina: First Fossil Record of the most Enigmatic Xenarthra. Journal of Vertebrate Paleontology. 39(5)e1716778. DOI 10.1080/02724634.2019.1716778

9 millones de años: Identifican el primer fósil de “pichiciego” similar a los “topos” y descubierto en la laguna de Chasicó en los ´70

[Herpetology • 2020] Platypelis ranjomena • Genetic Variability and Partial Integrative Revision of Platypelis Frogs (Microhylidae) with Red Flash Marks from eastern Madagascar

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 Platypelis ranjomena
Glaw, Scherz, Rakotoarison, Crottini, Raselimanana, Andreone, Köhler & Vences, 2020


Abstract 
We studied the genetic variability of Platypelis species (Anura: Microhylidae) with red fash marks from Madagascar based on mitochondrial (16S rRNA) and nuclear (RAG1) genes. Our molecular phylogenetic results suggest that the red colour evolved independently in the Platypelis barbouri complex and P. milloti and confrm the validity of a long-known but still undescribed new species from eastern Madagascar. Platypelis ranjomena sp. nov. is distinctly coloured with dark red to purple patches at the base of the forelimbs, in the inguinal region, and on the ventral parts of the hind limbs. It differs from most other arboreal cophylines by this red colour and from its sister species P. barbouri by smooth dorsal skin texture, iris colour, bioacoustics (much longer note duration in advertisement calls), and genetics (strong differences in mitochondrial and nuclear markers). The new species is widespread at low elevations along the east coast from Marojejy in the north to Manombo in the south. However, genetic evidence indicates substantial intraspecifc variability among populations, suggesting that the taxonomy of P. ranjomena and the other species in this complex is still incompletely resolved. An individual of P. barbouri from Mahasoa shared a nuclear allele with P. ranjomena, and its call was to some degree intermediate between these species, suggesting a possible case of hybridization in an area that we hypothesize could be a contact zone between the two species. Individuals from Madagascar’s northeast hitherto assigned to P. barbouri represent a lineage that is sister to the clade of P. barbouri + P. ranjomena. It is herein identifed as a new candidate species (Platypelis sp. Ca11), which occurs in syntopy with P. ranjomena. 

Key words Amphibia; Anura; colouration; Cophylinae; Madagascar; molecular genetics; new species; Platypelis ranjomena; systematics.


Fig. 3.  Platypelis ranjomena sp. nov. in life in dorsolateral (left) and ventral (right) views:
(a, b) adult male holotype ZSM 407/2010 from Ambodivoangy; (c, d) adult male paratype ZSM 406/2010 from Ambodivoangy; (e, f) adult male paratype ZFMK 59908 from Marojejy; (g, h) adult male specimen ZSM 2421/2007 from Manombo, provisionally assigned to this species.


Platypelis ranjomena sp. nov.

Diagnosis: A medium-sized arboreal cophyline frog, SVL 24.1–28.8 mm, tips of fngers and toes well expanded, third toe slightly shorter than ffth, hind limbs relatively short (tibiotarsal articulation reaching the tympanum), vomerine teeth absent (not recognisable when examining the oral cavity), tympanum small and poorly recognisable, dorsal skin smooth, belly reddish and yellowish with intensely dark red areas in the axilla, inguinal region, and on ventral parts of shanks. 
....

Etymology: The specifc epithet is derived from the Malagasy words ‘ranjo’ (= leg) and ‘mena’ (= red). It is used as a noun in the nominative singular, standing in apposition to the generic name.

Distribution: The distribution based on genetically confrmed locality records is shown in Figure 2 and indicates that the species is widespread in the lowlands of eastern and north-eastern Madagascar. Additional unconfrmed locality records based on photographs and non-sequenced voucher specimens include the coast of Masoala (near ‘Eco-Lodge chez Arol’, ..., ca. 21 m a.s.l.), Ambodiriana (...), and near Analalava (..., ca. 30 m a.s.l.) close to Foulpointe (= Mahavelona). The Manombo population deserves further study as it may represent a deep conspecifc lineage or (less likely) a more divergent form. 

Fig. 7.  Platypelis ranjomena sp. nov. in situ in Ambodivoangy, the type locality.
 (a) Individual of Platypelis ranjomena sp. nov. in life, as discovered in leaf axil of a banana-like plant at the type locality; (b) same leaf axil showing three adult individuals of Platypelis ranjomena sp. nov. together with freshly laid eggs; (c) semi-open habitat within rainforest in Ambodivoangy.

Available names: Several junior synonyms in the genus Platypelis must be excluded as available names for P. ranjomena. Platyhyla verrucosa Mocquard, 1901 and Platyhyla voeltzkowi Boettger, 1913 (both junior synonyms of P. grandis according to Noble & Parker, 1926) are larger, have a granular dorsal skin and completely lack any red ventral colour; Cophyla tuberculata Ahl, 1929, considered a further synonym of P. grandis based on the comparison of juveniles (Blommers-Schlösser & Blanc, 1991), has granular skin and differs in colour pattern (Ahl, 1929); Paracophyla tuberculata Millot & Guibé, 1951, currently considered a junior synonym of P. barbouri (Blommers-Schlösser & Blanc, 1991), has a similar dorsal pattern to P. ranjomena (see Guibé, 1978: Fig. 348) and no vomerine teeth but is very small (SVL 17 mm) and has distinct dorsal tubercles, which are absent in P. ranjomena. The holotype of Platypelis barbouri is a gravid female of 20 mm SVL with large ovary eggs of 1.5 mm diameter and rugose skin (Noble, 1940) and thus smaller and more rough-skinned than P. ranjomena. 

New candidate species: (Platypelis sp. Ca11) Our genetic analysis revealed a deep new lineage in this species group that was not previously recognised (Fig. 1): specimens hitherto assigned to P. barbouri from Marojejy closely resemble that species and in fact represent a lineage that is sister to the P. barbouri + P. ranjomena clade, herein named P. sp. Ca11 (Fig. 8). This lineage also occurs in Ambolokopatrika, and at Ambodivoangy in syntopy with P. ranjomena (Figs 1–2). We are confident that the assignment of the name P. barbouri should be attributed to the southern lineage, as the type locality of Fanovana Forest is located close to Andasibe in central eastern Madagascar. This therefore represents a new candidate species that should be taxonomically investigated in the future; we have here refrained from doing so, as insufficient material was available to us for examination.


Frank Glaw, Mark D. Scherz, Andolalao Rakotoarison, Angelica Crottini, Achille P. Raselimanana, Franco Andreone, Jörn Köhler and Miguel Vences. 2020. Genetic Variability and Partial Integrative Revision of Platypelis frogs (Microhylidae) with Red Flash Marks from eastern Madagascar. Vertebrate Zoology. 70(2); 141–156. DOI: 10.26049/VZ70-2-2020-04

     

[Paleontology • 2020] Geology and Paleontology of the Upper Cretaceous Kem Kem Group of eastern Morocco

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in Ibrahim, Sereno, Varricchio, et al., 2020. 
Artwork by Davide Bonadonna. 

Abstract
The geological and paleoenvironmental setting and the vertebrate taxonomy of the fossiliferous, Cenomanian-age deltaic sediments in eastern Morocco, generally referred to as the “Kem Kem beds”, are reviewed. These strata are recognized here as the Kem Kem Group, which is composed of the lower Gara Sbaa and upper Douira formations. Both formations have yielded a similar fossil vertebrate assemblage of predominantly isolated elements pertaining to cartilaginous and bony fishes, turtles, crocodyliforms, pterosaurs, and dinosaurs, as well as invertebrate, plant, and trace fossils. These fossils, now in collections around the world, are reviewed and tabulated. The Kem Kem vertebrate fauna is biased toward large-bodied carnivores including at least four large-bodied non-avian theropods (an abelisaurid, Spinosaurus, Carcharodontosaurus, and Deltadromeus), several large-bodied pterosaurs, and several large crocodyliforms. No comparable modern terrestrial ecosystem exists with similar bias toward large-bodied carnivores. The Kem Kem vertebrate assemblage, currently the best documented association just prior to the onset of the Cenomanian-Turonian marine transgression, captures the taxonomic diversity of a widespread northern African fauna better than any other contemporary assemblage from elsewhere in Africa.

Keywords: Africa, Cretaceous, dinosaur, Gara Sbaa Formation, Douira Formation, paleoenvironment, vertebrate


Predators abound on land, in the air and in water some 95 million years on the shores of northern Africa —as shown by the abundant fossils in the Kem Kem region. Large herbivores, such as the long-necked sauropod Rebbachisaurus, could have been hunted or scavenged by several large predators.
Artwork by Davide Bonadonna. 

The wealth of aquatic life, including shrimp, bony fish, lungfish and giant lobe-finned coelacanths, supported a remarkable array of predators, including the fish-eating sail-backed Spinosaurus and toothless pterosaur Alanqa soaring overhead.
Artwork by Davide Bonadonna. 




 Nizar Ibrahim, Paul C. Sereno, David J. Varricchio, David M. Martill, Didier B. Dutheil, David M. Unwin, Lahssen Baidder, Hans C. E. Larsson, Samir Zouhri and Abdelhadi Kaoukaya. 2020. Geology and Paleontology of the Upper Cretaceous Kem Kem Group of eastern Morocco. ZooKeys. 928: 1-216. DOI: 10.3897/zookeys.928.47517

Jurassic Park in Eastern Morocco: Paleontology of the Kem Kem Group

    

[Ichthyology • 2020] Lestidium longilucifer, L. australis & L. rofeni • Three New Species of the Barracudina Genus Lestidium (Aulopiformes: Paralepididae) from the Indo-West Pacific

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[upper; A, B, C] Lestidium longilucifer &
[lower; A, C, D]  Lestidium rofeni 

 Ho, Graham & Russell, 2020

Abstract
Three new species of the genus Lestidium with complete lateral line are described from the Indo-west Pacific Ocean. Lestidium longilucifer sp. nov., from Western Australia and Taiwan, belongs to the Lestidium atlanticum species complex and can be separated from other congeners by having 41–43 prehaemal vertebrae, 85–88 total vertebrae and 126–146 total lateral-line scales; and body proportions. Lestidium australis sp. nov. from eastern Australia and Lestidium rofeni sp. nov. from Taiwan and the Philippines together with Lestidium prolixum form the L. prolixum species complex. These three species can be separated from each other by a combination of different fin positions, vertebral formula, number of lateral-line scales and pigmentation.

Keywords: Pisces, taxonomy, ichthyology, Aulopiformes, Australia, Taiwan


Family Paralepididae
Genus Lestidium Gilbert, 1905
Lestidium Gilbert, 1905:607 
(Type species: Lestidium nudum Gilbert, 1905)

Diagnosis. Body moderately long, not especially slender; luminescent duct in abdominal cavity unbranched, extending forward to below opercle or before anterior margin of eye; nostrils well before a vertical through posterior end of maxilla; lateral line complete or incomplete; no light organ at anterior margin of orbit; a small luminescent duct along lower margin of orbit or absent; ventral adipose fin well-developed along margin between anus and AFO; DFO at above same vertical at or behind VFO, if behind, always before midpoint of V‒A; and anal-fin rays 26‒34.


FIGURE 1. Lestidium longilucifer sp. nov. 
A. Holotype, AMS I.22821-063, 260 mm SL, preserved. B. Paratype, AMS I.31175- 002, 219 mm SL, fresh, arrow points the VFO. C. Paratype, NMMB-P26017, 205 mm SL, fresh.

Lestidium longilucifer sp. nov. 
Long light-organ barracudina

Diagnosis. Lestidium longilucifer sp. nov. is one of three species recognized in the Lestidium atlanticum species complex with a luminescent duct extending beyond the anterior margin of the eye. It can be distinguished from its two congeners L. atlanticum and L. orientale in having prehaema vertebrae 41–43; predorsal vertebrae 38–40; prepelvic vertebrae 37–39; preanal vertebrae 56–59; total vertebrae 85–88; total lateral-line scales 126–146; and relatively short jaws.

Etymology. The specific name longilucifer is derived from the combination of Latin longus and lucifer, referring to the long luminescent duct that extends well forward of the eye. 

Distribution. The species is currently known only from the type series collected from northwestern Australia and southern Taiwan.


Lestidium nigrirostrum sp. nov.
 Australian Robust Barracudina

Diagnosis. A species in the Lestidium prolixum species complex with a complete lateral-line, and a simple luminescent duct originating below opercle; it can be further distinguished from two other congeners in the species complex in having 31‒34 anal-fin rays; prehaemal vertebrae 35–38 and total vertebrae 87–90; lateral-line ended at caudal fin base, with 142–157 scales; DFO clearly behind tip of adpressed pelvic fin, V–D 5.6–8.5%SL and 28.6–38.6%V–A; 5‒7 lateral-line scales and 4‒7 vertebrae between VFO and DFO; dorsum dark brownish, melanophores extending downward to the lateral-line along its entire upper margin; anterior portions of snout and lower jaw blackish; abdomen with a very broad black sub-margin. 

Etymology. The specific name is derived from Latin niger and rostrum, in referring to the black snout. 

Distribution. The species is currently known from waters off eastern Australia, ranging from the Coral Sea off central Queensland to Bass Strait and into the Tasman Sea.


FIGURE 6. Lestidium rofeni sp. nov.
A. Holotype, NMMB-P28479, 245 mm SL, fresh. B. preserved holotype. C. Paratype, NMMB-P27926, 248 mm SL, fresh. D. Paratype, NMMB-P27927, 239 mm SL, fresh.

Lestidium rofeni sp. nov. 
Rofen’s Barracudina

Diagnosis. A species in the Lestidium prolixum species complex with a complete lateral line and a simple luminescent duct originating below opercle.; L. rofeni can be further distinguished from two other congeners in the species complex in having 30‒33 anal-fin rays; prehaemal vertebrae 36–38 and total vertebrae 87–90; lateral-line ending at caudal fin base, with 123–139 scales; DFO clearly behind tip of adpressed pelvic fin; V–D 6.7–8.7% SL and 30.2–36.7% V–A; 5‒7 lateral-line scales and 5‒8 vertebrae between VFO and DFO; scattered melanophores away from upper margin of lateral line before VFO, entirely translucent on remaining section of lateral line; abdominal ridge with none or scattered melanophores.

Etymology. The species is named after Robert R. Rofen (previously R. R. Harry), former research director of George Vanderbilt Foundation, Stanford University, who contributed a lot of knowledge on paralepidid fishes.

Distribution. The species is currently known only from Taiwan and the Philippines, but is likely widespread in northwestern Pacific Ocean. Off southern Taiwan, smaller specimens were collected by mid-water trawl (<100 m depth) and larger specimens usually caught by demersal trawl (> 300 m), which may suggest the adults shift to deeper waters with growth/age.


Hsuan-Ching Ho, Ken Graham and Barry Russell. 2020. Three New Species of the Barracudina Genus Lestidium (Aulopiformes: Paralepididae) from the Indo-West Pacific. Zootaxa. 4767(1); 71–88.  DOI: 10.11646/zootaxa.4767.1.3


[Fungi • 2020] Purple Haze: Cryptic Purple sequestrate Cortinarius (Basidiomycota: Agaricomycetes) in New Zealand

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Cortinarius violaceovolvatus var. viola (Soop) A.R. Nilsen & Orlovich

in Nilsen, Wang, Soop, ... et Orlovich, 2020. 

ABSTRACT
Cortinarius is a species-rich ectomycorrhizal genus containing taxa that exhibit agaricoid or sequestrate basidiome morphologies. In New Zealand, one of the most recognizable and common Cortinarius species is the purple sequestrate fungus, C. porphyroideus. We used genome skimming of the almost 100-y-old type specimen from C. porphyroideus to obtain the nuc rDNA internal transcribed spacer region ITS1-5.8S-ITS2 (ITS barcode) and partial nuc rDNA 28S (28S) sequences. The phylogenetic position of C. porphyroideus was established, and we found that it represents a rarely collected species. Purple sequestrate Cortinarius comprise multiple cryptic species in several lineages. We describe four new species of Cortinarius with strong morphological similarity to C. porphyroideus: Cortinarius diaphorus, C. minorisporus, C. purpureocapitatus, and C. violaceocystidiatus. Based on molecular evidence, Thaxterogaster viola is recognized as Cortinarius violaceovolvatus var. viola. These species are associated with Nothofagus (southern beech) and have very similar morphology to C. porphyroideus but are all phylogenetically distinct based on molecular data.

KEYWORDS: Genome skimming, Nothofagus, secotioid, Thaxterogaster, truffle-like, 5 new taxa


TAXONOMY: 
Cortinarius diaphorus Soop, A.R. Nilsen & Orlovich,sp. nov.

Etymology: diaphorus (Greek), διαφορος different,” as being similar, yet different from Cortinarius porphyroideus.


Cortinarius minorisporus X. Yue Wang, J.A. Cooper, A.R. Nilsen & Orlovich, sp. nov.

Etymology: minorisporus (Latin), pertains to the smaller spore size compared with other purple sequestrate species.


Cortinarius purpureocapitatus X. Yue Wang, J.A. Cooper, A.R. Nilsen & Orlovich, sp. nov.

Etymology:purpureocapitatus (Latin), pertaining to the purple color of the pileus.


Cortinarius violaceocystidiatus A.R. Nilsen & Orlovich, sp. nov.

Etymology: violaceocystidiatus (Latin), referring to the infrequent purple cystidia.


Cortinarius violaceovolvatus var. viola (Soop) A.R. Nilsen & Orlovich, comb. nov. et stat. nov.

Basidiomes of Cortinarius violaceocystidiatus var. viola (OTA64113).


Andy R. Nilsen,Xin Yue Wang, Karl Soop, Jerry A. Cooper, Geoff S. Ridley, Michael Wallace, Tina C. Summerfield, Chris M. Brown and David A. Orlovich. 2020. Purple Haze: Cryptic Purple sequestrate Cortinarius in New Zealand. Mycologia. DOI: 10.1080/00275514.2020.1730120  


[Botany • 2019] Conamomum odorum (Zingiberaceae) • A New Species from central Vietnam

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Conamomum odorum Luu, H. D. Tran & G. Tran

in Luu, Tran, ... et Tran, 2019. 
Sa nhân thơm  ||  DOI: 10.15625/0866-7160/v41n3.13671 
Photos: Luu Hong Truong

Abstract
Conamomum odorum is described as a new species from Khanh Hoa Province, Central Vietnam. It is characterized by sweet smell, striate and narrowly elliptic leaf leaves with short petiole and ligule, ovoid congested inflorescence, pubescent calyx, cream corolla lobes, yellow, obovate and reflexed labellum with median red bands at base and hairy ovary. The new species is illustrated with detailed photographs of key characters and morphologically compared to its closest congeners C. piereanum and C. rubidum. A distribution map of the genus in Vietnam is provided.

Keywords: Conamomum odorum, fragrant, new species, Vietnam, Zingiberaceae.

Figure 2.  Conamomum odorum.
A. Habit. B. Rhizome and inflorescences. C. Ligule. D. Inflorescence. E. Flower dissection. F. Ovary with epigynous glands and anthers (side and front views)
[Photos: Luu Hong Truong]

 Conamomum odorum Luu, H. D. Tran & G. Tran, sp. n.

 Morphologically closest to Conamomum rubidum in having yellow flowers, radical inflorescence and 3-lobed labellum with reflexed margins, but differs by smaller laminas (25–30 × 3–3.5 cm), shorter petiole (2–4 mm), ovoid inflorescence, fully pubescent bracts, pubescent calyx, cream corolla lobes, slightly 3-lobed and obovate labellum, hairy ovary and longer filament (ca. 13 mm) (vs. 30–45 × 4.5–7 cm laminas, 5–9 mm petiole, obovoid inflorescence, basally pubescent bracts, glabrous calyx, reddish corolla lobes, strongly 3-lobed and reniform labellum, glabrous ovary and 7–8 mm long filament).
...

EtymologyThe specific epithet refers to the special fragrance of the whole plant. After the specimens are dried, the odor becomes stronger and lasts for several years in the herbarium specimens. 

Proposed Vietnamese name: Sa nhân thơm. 

Notes: The new taxon is morphologically closest to C. rubidum as they share the following characters: radical congested inflorescence, yellow and 3-lobed labellum with reflexed margins. However, they can be distinguished by key morphological differences as shown in the diagnosis and table 1. The shape and color of the labellum in C. odorum may recall those in C. pierreanum Gagnep. from Cambodia (de Boer, 2018; Gagnepain, 1906 & 1908; Lamxay & Newman, 2012) but both species have many different morphological characters (table 1) that make them distinct from each other.


Luu Hong Truong, Tran Huu Dang, Nguyen Quoc Dat, Nguyen Tran Quoc Trung and Tran Gioi. 2019. Conamomum odorum, A New Species of Zingiberaceae from central Vietnam. ACADEMIA JOURNAL OF BIOLOGY. 41(3); 41(3): 55–59. DOI: 10.15625/0866-7160/v41n3.13671


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